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arXiv:2212.13138cs.CL

Large Language Models Encode Clinical Knowledge

Karan Singhal, Shekoofeh Azizi, Tao Tu, S. Sara Mahdavi, Jason Wei, Hyung Won Chung, Nathan Scales, Ajay Tanwani, Heather Cole-Lewis, Stephen Pfohl, Perry Payne, Martin Seneviratne, Paul Gamble, Chris Kelly, Nathaneal Scharli, Aakanksha Chowdhery, Philip Mansfield, Blaise Aguera y Arcas, Dale Webster, Greg S. Corrado, Yossi Matias, Katherine Chou, Juraj Gottweis, Nenad Tomasev, Yun Liu, Alvin Rajkomar, Joelle Barral, Christopher Semturs, Alan Karthikesalingam, Vivek Natarajan

Abstract

Large language models (LLMs) have demonstrated impressive capabilities in natural language understanding and generation, but the quality bar for medical and clinical applications is high. Today, attempts to assess models' clinical knowledge typically rely on automated evaluations on limited benchmarks. There is no standard to evaluate model predictions and reasoning across a breadth of tasks. To address this, we present MultiMedQA, a benchmark combining six existing open question answering datasets spanning professional medical exams, research, and consumer queries; and HealthSearchQA, a new free-response dataset of medical questions searched online. We propose a framework for human evaluation of model answers along multiple axes including factuality, precision, possible harm, and bias. In addition, we evaluate PaLM (a 540-billion parameter LLM) and its instruction-tuned variant, Flan-PaLM, on MultiMedQA. Using a combination of prompting strategies, Flan-PaLM achieves state-of-the-art accuracy on every MultiMedQA multiple-choice dataset (MedQA, MedMCQA, PubMedQA, MMLU clinical topics), including 67.6% accuracy on MedQA (US Medical License Exam questions), surpassing prior state-of-the-art by over 17%. However, human evaluation reveals key gaps in Flan-PaLM responses. To resolve this we introduce instruction prompt tuning, a parameter-efficient approach for aligning LLMs to new domains using a few exemplars. The resulting model, Med-PaLM, performs encouragingly, but remains inferior to clinicians. We show that comprehension, recall of knowledge, and medical reasoning improve with model scale and instruction prompt tuning, suggesting the potential utility of LLMs in medicine. Our human evaluations reveal important limitations of today's models, reinforcing the importance of both evaluation frameworks and method development in creating safe, helpful LLM models for clinical applications.

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DOI
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cs.CLComputation and Language

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Linked by 6 identifiable commenters in 6 comments across 5 threads, from Dec 2022 to Mar 2023. Found in 5 HN submissions from Dec 2022 to Jan 2023. Open submission discussions.

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Discussed in comments5 threads

    • One thing that jumps out is that the paper fails to provide a proper direct comparison with Med-PaLM, only mentioning the latter in passing almost as an afterthought. Looking at arXiv timestamps, the Med-PaLM preprint has been out of three months (given the rate at which this…

      aix1View on HNParent context

    • Late to the thread here, but the paper announcing Med-PaLM (https://arxiv.org/abs/2212.13138) does not report many benchmark results on Med-PaLM and is instead mostly about Flan-PaLM 540B (which is compared against in this paper). I am curious if any other Med-PaLM benchmarks…

      FlyingLawnmowerView on HNParent context

    • Related: "Large Language Models Encode Clinical Knowledge" https://arxiv.org/abs/2212.13138 "On the MedQA dataset consisting of USMLE style questions with 4 options, our Flan-PaLM 540B model achieved a multiple-choice question (MCQ) accuracy of 67.6%..." "The percentages of…

      nopinsightView on HNParent context

    • Oh, I mistook this paper for the one that was released more recently from DeepMind + Google. [1] [1] Can large language models reason about medical questions? https://arxiv.org/abs/2212.13138

      rafaeleroView on HNParent context

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