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arXiv:2007.15673q-bio.PE

Superspreading of SARS-CoV-2 in the USA

Calvin Pozderac, Brian Skinner

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Abstract

A number of epidemics, including the SARS-CoV-1 epidemic of 2002-2004, have been known to exhibit superspreading, in which a small fraction of infected individuals is responsible for the majority of new infections. The existence of superspreading implies a fat-tailed distribution of infectiousness (new secondary infections caused per day) among different individuals. Here, we present a simple method to estimate the variation in infectiousness by examining the variation in early-time growth rates of new cases among different subpopulations. We use this method to estimate the mean and variance in the infectiousness, $β$, for SARS-CoV-2 transmission during the early stages of the pandemic within the United States. We find that $σ_β/μ_β\gtrsim 3.2$, where $μ_β$ is the mean infectiousness and $σ_β$ its standard deviation, which implies pervasive superspreading. This result allows us to estimate that in the early stages of the pandemic in the USA, over 81% of new cases were a result of the top 10% of most infectious individuals.

arXiv comments
7+9 pages pages, 3+3 figures; slightly updated numerical estimates; published version
Journal reference
PLoS ONE 16(3): e0248808 (2021)
DOI
doi:10.1371/journal.pone.0248808
Subjects
q-bio.PEPopulations and Evolution physics.soc-phPhysics and Society q-bio.QMQuantitative Methods

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