BGT: efficient and flexible genotype query across many samples — mentioned by temujin

Fri, 10 Jul 2015 20:19:42 GMT

Better representations are already used for downstream data analysis and continue to be improved; see e.g. http://arxiv.org/abs/1506.08452 . However, algorithms for producing variant calls from raw sequencer output are also improving over time, and the way to get the most benefit from them is to save the old raw data so newer algorithms can be applied to them. That's where the storage challenges come into play.

Paper and discussion history. A mention is not an endorsement.

BGT: efficient and flexible genotype query across many samples · HackerPapers discussions

BGT: efficient and flexible genotype query across many samples — mentioned by temujin