arXiv:1311.0081stat.ME
To P or not to P: on the evidential nature of P-values and their place in scientific inference
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Abstract
The customary use of P-values in scientific research has been attacked as being ill-conceived, and the utility of P-values has been derided. This paper reviews common misconceptions about P-values and their alleged deficits as indices of experimental evidence and, using an empirical exploration of the properties of P-values, documents the intimate relationship between P-values and likelihood functions. It is shown that P-values quantify experimental evidence not by their numerical value, but through the likelihood functions that they index. Many arguments against the utility of P-values are refuted and the conclusion is drawn that P-values are useful indices of experimental evidence. The widespread use of P-values in scientific research is well justified by the actual properties of P-values, but those properties need to be more widely understood.
Unless I am misunderstanding something, their figure 3 seems to be plotting effect size vs p-value... So all it would be showing is that they had more data from lung adenocarcinomas (ie sample size is larger for that cancer type). It isn't 100% clear to me if they shared the…
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